SulfAtlas: The Database of Sulfatases

Citation

Barbeyron T., Brillet-Guéguen L., Carré W., Carrière C., Caron C., Czjzek M., Hoebeke M., Michel G. 2016. Matching the Diversity of Sulfated Biomolecules: Creation of a Classification Database for Sulfatases Reflecting Their Substrate Specificity. PLoS One; 11(10):e0164846. https://marineinfo.org/id/dataset/5939

Contact:

Dedicated website

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Description

In the context of the explosion of genomic data, the functional annotation of sulfatases is thus particularly prone to flaws and misinterpretations. A classification system allowing for a better prediction of substrate specificity and for setting the limit of functional annotations was therefore urgently needed for sulfatases. SulfAtlas describes the family and sub-families of structurally-related sulfatases. Sub-families are created based on phylogenetic analyses and essentially correspond to different substrate specificities. more

Database contents Sulfatases: 35,091 Families : 4 Families Name : Sulfatases S: 1 30,727 S: 2 1,431 S: 3 2,838 S: 4 95 Taxonomy: All (35,090) Archaea (173) Bacteria (29,428) Eukaryota (5,465) Viruses (3) Structure (27)

Scope

Themes:

Biology, Biology > Organic (& bio-) chemistry

Keywords:

Aquaculture, Data, Diversity, Education & Training, Phylogenetics, Sulfatases

Parameter

Amino acids

URLs

Other:

https://www.enzyme-database.org/

https://www.rcsb.org/

http://www.uniprot.org