Publicaties | Instituten | Personen | Datasets | Projecten | Kaarten | Infrastructuur
[ meld een fout in dit record ] Print deze pagina

SulfAtlas: The Database of Sulfatases
Citatie
Barbeyron T., Brillet-Guéguen L., Carré W., Carrière C., Caron C., Czjzek M., Hoebeke M., Michel G. 2016. Matching the Diversity of Sulfated Biomolecules: Creation of a Classification Database for Sulfatases Reflecting Their Substrate Specificity. PLoS One; 11(10):e0164846. https://marineinfo.org/doc/dataset/5939
Contact:

Specifieke website
Beschikbaarheid: Vrij beschikbaar
The data are freely available to anybody and may be used for any purpose. Usage acknowledgement may be required

Beschrijving
In the context of the explosion of genomic data, the functional annotation of sulfatases is thus particularly prone to flaws and misinterpretations. A classification system allowing for a better prediction of substrate specificity and for setting the limit of functional annotations was therefore urgently needed for sulfatases. SulfAtlas describes the family and sub-families of structurally-related sulfatases. Sub-families are created based on phylogenetic analyses and essentially correspond to different substrate specificities. meer

Database contents Sulfatases: 35,091 Families : 4 Families Name : Sulfatases S: 1 30,727 S: 2 1,431 S: 3 2,838 S: 4 95 Taxonomy: All (35,090) Archaea (173) Bacteria (29,428) Eukaryota (5,465) Viruses (3) Structure (27)

Scope
Thema's:
Biologie, Biologie > Organisch (& bio-) chemie
Kernwoorden:
Aquaculture · Data · Diversiteit · Education & Training · Fylogenetica · Sulfatases

Parameter
Amino acids


Dataset status: Gestart
Data type: Dataproducten
Data oorsprong: Data collectie
Datum van vrijgave: 2016-11-02
Metadatarecord aangemaakt: 2018-05-22
Informatie laatst gewijzigd: 2018-05-23
Alle informatie in het Integrated Marine Information System (IMIS) valt onder het VLIZ Privacy beleid